YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MJK1_METJA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METYEKIELG IIVIILLILI ESVILMTVEG WDFFTAFYTA VVTISTVGYG DYTPQTFLGK  60
   61 LSVIIYIFAG VGAVAYTMGN IASFFIEGHF RKYFRLRKMM DRIKKLNNHY IICGYGRLGK 120
  121 VIAEEFKKCN IPFVIIDSDE KLLEEALEKD PNLICIVGDA TSDDILKKAK IEKAKGLISV 180
  181 VSSDAENVFI TLSAKKLNPN IYIVAKAEKP STLDKLIKAG ADRAVCPYIV GGMEIARIAI 240
  241 NPDIVEFIHS LVATEEDMEV RRYIVKNKEL DNKLLKDSGI REKTGATILA VKKGDKTITS 300
  301 PPPDTVINIG DIIYAFGTKE QLEKLKRYVE GVE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.87
Transmembrane Helix	9	28	0.94
Non-Cytoplasmic	29	62	0.56
Transmembrane Helix	63	86	0.90
Cytoplasmic	87	333	0.55