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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MMP2_RABIT
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALGARGAL AGFLRALCVL GCLLGRATAP PSPVIKFPGD VAPKTDKELA VQYLNTFYGC  60
   61 PKDSCNLFVL KDTLKKMQKF FGLPQTGELD QSTIETMRKP RCGNPDVANY NFFPRKPKWD 120
  121 KNQITYRIIG YTPDLDPETV DDAFARAFQV WSNVTPLRFS RIHDGEADIM INFGRWEHGD 180
  181 GYPFDGKDGL LAHAFAPGTG VGGDSHFDDD ELWTLGEGQV VRVKYGNADG EYCKFPFLFN 240
  241 GKEYTSCTDT GRSDGFLWCS TTYNFEKDGK YGFCPHEALF TMGGNADGQP CKFPFRFQGT 300
  301 SYSSCTTEGR TDGYRWCGTT EDYDRDKKYG FCPETAMSTI GGNSEGAPCV FPFTFLGNKY 360
  361 ESCTSAGRSD GKMWCATSTN YDDDRKWGFC PDQGYSLFLV AAHEFGHAMG LEHSQDPGAL 420
  421 MAPIYTYTKN FRLSQDDIKG IQELYGASPD AGTDAGTGPT PTLGPVTPEI CTQDIVFDGI 480
  481 AQIRGEIFFF KDRFIWRTVT PGDKPMGPLL VATFWPELPE KIDAVYEAPQ EEKAVFFAGN 540
  541 EYWVYSASTL ERGYPKPLTS LGLPPDVQRV DAAFNWSKNK KTYIFAGDKF WRYNEVKKKM 600
  601 DPGFPRLIAD AWNAIPDHLD AVVDLQGSGH SYFFKGTYYL KLENQSLKSV KVGSIKTDWL 660
  661 GC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle