YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MQO_OCEIH
Protein type: Transmembrane
Type Confidence: 0.38
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKHTQADV ILIGAGIMSA TLGSLLKELS PNLEIRVFEK LENPGEESSN EWNNAGTGHS  60
   61 ALCELNYTSE RTDGSIDINK AVKVNEQFQL SRQFWSYLVN RNLIRNPEDF IRALPHISLV 120
  121 QGEDNVTFLR KRFKALVNHP LFNGMEFSDD NEKLKEWMPL IMDKRDTNEP IAATKIDSGT 180
  181 DVNFGALTRL LFQEFDHKGI DVNYNHSVED IKRNSEGLWE VKVHDMNDEK IEYHTAKFVF 240
  241 IGAGGGSLPL LQKTGIKESK HIGGFPVSGL FMVCNNPEVI EQHHAKVYGK AKVGAPPMSV 300
  301 PHLDTRFIDG KKSLLFGPFA GFSPKFLKTG SLFDLMHSVK SDNLFTMLSA GMKELPLTKY 360
  361 LIQQVVLSNE KRMEELREFI PNAQSKDWDI VIAGQRVQVI KDTEDGGKGT LQFGTEVVCG 420
  421 EDGTMAALLG ASPGASTAVH VMLEVIQKCF PEHLQEWEPK IKEMIPSYGI ALSENPELYK 480
  481 EIEVSIEKAL GLKNEEPMVI PS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle