YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OMPK_VIBPA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSLLALSL LAATSAPVLA ADYSDGDIHK NDYKWMQFNL MGAFDELPGE SSHDYLEMEF  60
   61 GGRSGIFDLY GYVDVFNLAS DKGSDKVGDP KIFMKFAPRM SIDGLTGKDL SFGPVQELYV 120
  121 ATLFEWDGTD YKTNPFSVNN QKVGIGSDVM VPWFGKVGVN LYGTYQGNQK DWNGFQISTN 180
  181 WFKPFYFFEN GSFISYQGYI DYQFGMKEKY SSASNGGAMF NGIYWHSDRF AVGYGLKGYK 240
  241 DVYGIKDSDA LKSTGFGHYV AVTYKF

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	266	0.99