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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OPGH_PSEPK
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSSARPES LGEYLAHLPL SDEQRAELAS CTSFSELHQR LAANPAASSA EAVQASVGPR  60
   61 LTVGSAAELE EAEMLGVDGS GRLCLKIAPP IKRTKVVPEP WRTNVLIRMW RRMTGRPNAP 120
  121 QPPKRELPPA RWRTVGSIRR YILLALMIGQ TIVAGWYMKG ILPYQGWSFV DFDEIVNQPL 180
  181 WDTVVQVWPY ALQTSILILF GILFCWVSAG FWTALMGFLE LLTGRDKYKI SGSSAGNEPI 240
  241 APEARTALVM PICNEDVPRV FAGLRATFES VAASGNLDRF DFFVLSDTND TDIAVAEQQA 300
  301 WLDVCRETKG FGRIFYRRRR RRVKRKSGNL DDFCRRWGGE YKYMVVLDAD SVMSGECLSS 360
  361 LVRLMEANPD AGIIQTGPKA SGMDTLYARM QQFATRVYGP LFTAGLHFWQ LGESHYWGHN 420
  421 AIIRMKPFIE HCALAPLPGK GAFAGAILSH DFVEAALMRR AGWGVWIAYD LPGSYEELPP 480
  481 NLLDELKRDR RWCHGNLMNF RLFLVKGMHP VHRAVFLTGV MSYLSAPLWF LFLVLSTALL 540
  541 ATNTLMEPQY FIEPYQLYPL WPQWHPEKAV ALFSTTIVLL FLPKLLSVIL IWAKGAVEYG 600
  601 GRVKVTLSML MEMLFSMLLA PVRMIFHTRF VLAAFLGWAA TWNSPQRDDD STPWGEAVRR 660
  661 HGPQTLLGIA WAALVAWLNP SFLWWLAPIV GSLVLSIPVS VISSRTRLGL AAKDEKLFLI 720
  721 PEEYATPQEL LATDQYTHEN RWHALHDGFV RAVVDPRQNA LACAMATARH GQAAPIEALR 780
  781 AERVAKAIEV GPKGLDLNTR LALLSDPVAL SRLHEQVWAE HNAAWIDVWR ASINNDPHSP 840
  841 LLPLHPENAG QPSLVGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle