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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OPGH_SHEON
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVSESSVLD TEVLVGGSAM PNERPGPMEP QSLSQMPEGF PRRSTVANGV RSRASRRFFV  60
   61 VGGALLLSSF AIYEMGAVFS IGGITPLEYL MLALFAINFC WIALAFCSGI AGFLLLLKKP 120
  121 KPNELAQTEL HTRTAILMPT YNESPDRVFS AVSVMAEALS QTGHGHAFDW FILSDTTDPE 180
  181 IALLEEQAFL VLRQETHKHS RVYYRRRRKN VARKAGNVAD FCRRWGSRYD HLLVLDADSL 240
  241 MESSTITGLA QRMQADPDAG LIQTIPSLIN GTTLMARLQQ FAARIYGPVI GTGLGWWVQK 300
  301 EGNFWGHNAI IRTEAFMGAA GLPNLKGKPP FGGHILSHDF VEAALIRRAG WSVVIAYDLP 360
  361 GSYEECPPSI VDLAVRDRRW CQGNLQHSRI LPTKGLHWVS RLHLMTGIMA YLSSPFWLLL 420
  421 ILTGLMLALQ AHFIRPEYFT DQFSLFPTWP IMDSDRALRL FYITMVVLFG PKIFGVLLLL 480
  481 KDGKFARSVG GRIKAMFSVL FEVILSALIA PIMMFIHCGA VMSILMGRDS GWSPQRRDDG 540
  541 SMPWLTLIYR HRWHMLAGVM LGYAAILDSL TLLAWMSPAL IGLWLAVPIS AWTGSIKIGE 600
  601 FFKRIGILAT PEERNPAPIC IRAQEARAAY QSHIEQPWTL AQLLKDPALM ELHLAMVDKQ 660
  661 PLRAAGTPIE PVEAIVHVKV HEAQCQQSAL ALFNRQEMAL VLANPLMLRS LQKLPEQFVP 720
  721 EDLVSFC

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