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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YIDC_PASMU
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRRSLLVI ALLFISFLVY QQWQLDYHTP KPVATEQVKV SSDVPASSAS SSSDIATTAQ  60
   61 AQGRIITLEN DVFRLEVDTL GGDVVHSELL KYDAELNSNT PFTLLTNKAN HVYIAQSGLV 120
  121 GKDGIDTKAG RANYQVDGDT FKLADGQNEL AVPFVFEKDG VTFRKIFVLK RGAYDIAVNF 180
  181 EIDNQSDKTI EVEPYGQLRH TLVEDTGNVA MPTYTGGAYS SSETNYKKYS FADMEKANLS 240
  241 ISTKAGWVAV LQHYFVSAWI PNQDADNQLY SLTDKANNLA SIGYRGPVTA IPAGAKETIR 300
  301 SSLWTGPKLQ DQMATVANHL DLSVDYGWAW FIAKPLFWLL TFIQSIVQNW GLAIIGVTLV 360
  361 VKAILYPLTK AQYTSMAKMR MLQPKLQEMR ERFGEDRQRM SQEMMKLYKE EKVNPLGGCL 420
  421 PILLQMPIFI ALYWTFLEAV ELRHAPFFGW IQDLSAQDPY YILPILMGAS MFLLQKMSPT 480
  481 PVADPTQQKI MNFMPLIFMV FFLWFPSGLV LYWLVSNLIT IAQQQLIYRG LEKKGLHSRH 540
  541 K

YRC Informatics Platform - Version 3.0
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