YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEPE_XENLA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTMRRHLLL VSNSTLHGGG YLEHCQEHIL KFLGAQVKRV LFIPYALHDR DAYAKTARQK  60
   61 FEALGYGLDS VHESPDPVDA VKKAEAIFIG GGNTFRLLKA LYDNDLIAAI RKRVLEDGVP 120
  121 YIGSSAGTNV ATISINTTND MPIVYPPSLK ALELVPFNIN PHYLDPDGNS KHMGETREQR 180
  181 ITQYHEEHDT PPVLGLREGC FLLVEGDKAT LLGITRARLF LRGKNPTEHE PGHDFSFLLG 240
  241 HS

Type	Start	End	Confidence
Signal Peptide	1	18	0.51
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	242	0.99