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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLB1_CANAL
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILHHLLILL IINYCVATSP TNGYAPGPVS CPSSQLIRSG SQGINPNEQS YINARYPIAK  60
   61 QALSKFLHNA NLQNFDVDSF LAHSNPTIGL AFSGGGYRAM LTGAGEISSL DSRTKTNTPV 120
  121 LAGILQASSY IAGLSGGSWL VGSLASNNLN SVDDMLSQGL WELTHSFLSY YGIEHPIKQV 180
  181 EEWVNVGNQV ASKRNANFNV SLTDIYGRLL SYPLLTNTED EGDAYLWSDV TSASNFQSHQ 240
  241 MPFPILISDG RAPDTTIINL NSTVIELTPY EFGSWDPSLN EFVDTRYLGT KLDNGRPTGK 300
  301 CYNGFDNAGF FMGTSSALFN EAVLSITEAN IPSFLKDIID DILVDPILKS NIDVSAYNPN 360
  361 PFFKSSGSNT AISQSKNLYL VDGGEDGQNI PISPLLHRNV SAIFAFDNSN DVLNWPDGTS 420
  421 LVKTYERQFS SQGNGIAFPY VPDQYTFRNL NLTSKPTFFG CDAKNLTSLT KDIYDVPLVI 480
  481 YLANRPFTYW SNTSTFKLTY DDNERQGMIS NGFEIATRSS GSLDDEWAAC VGCAIIRREQ 540
  541 ERQGIEQTEQ CKRCFENYCW DGTIYKGEPL GENFSDDGLT NSATEYNSNN VAGFNDGGTS 600
  601 ILKKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle