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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLMN_MACEU
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYGKVIFLF LLFLKSGQGE SLENYIKTEG ASLSNSQKKQ FVASSTEECE ALCEKETEFV  60
   61 CRSFEHYNKE QKCVIMSENS KTSSVERKRD VVLFEKRIYL SDCKSGNGRN YRGTLSKTKS 120
  121 GITCQKWSDL SPHVPNYAPS KYPDAGLEKN YCRNPDDDVK GPWCYTTNPD IRYEYCDVPE 180
  181 CEDECMHCSG ENYRGTISKT ESGIECQPWD SQEPHSHEYI PSKFPSKDLK ENYCRNPDGE 240
  241 PRPWCFTSNP EKRWEFCNIP RCSSPPPPPG PMLQCLKGRG ENYRGKIAVT KSGHTCQRWN 300
  301 KQTPHKHNRT PENFPCRGLD ENYCRNPDGE LEPWCYTTNP DVRQEYCAIP SCGTSSPHTD 360
  361 RVEQSPVIQE CYEGKGENYR GTTSTTISGK KCQAWSSMTP HQHKKTPDNF PNADLIRNYC 420
  421 RNPDGDKSPW CYTMDPTVRW EFCNLEKCSG TGSTVLNAQT TRVPSVDTTS HPESDCMYGS 480
  481 GKDYRGKRST TVTGTLCQAW TAQEPHRHTI FTPDTYPRAG LEENYCRNPD GDPNGPWCYT 540
  541 TNPKKLFDYC DIPQCVSPSS FDCGKPRVEP QKCPGRIVGG CYAQPHSWPW QISLRTRFGE 600
  601 HFCGGTLIAP QWVLTAAHCL ERSQWPGAYK VILGLHREVN PESYSQEIGV SRLFKGPLAA 660
  661 DIALLKLNRP AAINDKVIPA CLPSQDFMVP DRTLCHVTGW GDTQGTSPRG LLKQASLPVI 720
  721 DNRVCNRHEY LNGRVKSTEL CAGHLVGRGD SCQGDSGGPL ICFEDDKYVL QGVTSWGLGC 780
  781 ARPNKPGVYV RVSRYISWIE DVMKNN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle