YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PONA_DICDI
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.82
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVLRNLLAL VTLALLFTLS SAQYTLSVSN SASGSKCTTA VSAKLNACNT GCLNSFNIVE  60
   61 SSNGKGLVFK TFINAACSGE YESLSQFTCA ANQKIPTTSY IVSCNSTPSS NSTTDSDSSS 120
  121 GSTVMIGLAS SLLFAFATLL ALF

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	120	0.99
Transmembrane Helix	121	142	0.76
Cytoplasmic	143	143	0.82