YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSBR_SPIOL
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSVMSSLS LKPSSFGVDT KSAVKGLPSL SRSSASFTVR ASGVKKIKVD KPLGIGGGMK  60
   61 LRDGVDSSGR KPTGKGVYQF VDKYGANVDG YSPIYNEEEW APTGDVYAGG TTGLLIWAVT 120
  121 LAGLLAGGAL LVYNTSALAQ

Type	Start	End	Confidence
Cytoplasmic	1	112	0.70
Transmembrane Helix	113	133	0.88
Non-Cytoplasmic	134	140	0.63