YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSBR_TOBAC
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTVMSLKP APFSVEKTAV KGLPSLARSS SSFRVQASGV KKLKTDKPYG INGSMSLRDG  60
   61 VDASGRKQKG KGVYQFVDKY GANVDGYSPI YNTDDWSPSG DVYVGGTTGL AIWAVTLVGI 120
  121 LAGGALLVFN TSALAQ

Type	Start	End	Confidence
Cytoplasmic	1	108	0.64
Transmembrane Helix	109	129	0.91
Non-Cytoplasmic	130	136	0.51