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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RD21A_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA  60
   61 QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF ADLTNDEYRS KYLGAKMEKK 120
  121 GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD 180
  181 LITLSEQELV DCDTSYNEGC NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA 240
  241 KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV 300
  301 AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN 360
  361 PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW GCCPLEAATC CDDNYSCCPH 420
  421 EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle