YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK27_ORYSA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMAFTLVG AFKGMSLSSP CHSSSSASFL RADRVSLSVG GGVGMGVPMT MPVRRLTIQM  60
   61 AHKKGAGSTK NGRDSPGQRL GVKIYGDQVA KPGAIIIRQR GTRVYPGNNV GMGKDHTLFS 120
  121 LIDGLVKFEK YGPDKKKVSV YPYEKQPENP NSYRARKREY FRMQRERKKA RAEGIVEVQL 180
  181 VLAAADESPE VNADC

Type	Start	End	Confidence
Signal Peptide	1	23	0.92
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	195	0.97