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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SE3AA_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYLVGIFLL LCGVALPGRV APQHTKENVP RLKLSYNEML ESSNLVTFTG LANSSGYDTF  60
   61 LMDGERGRLL VGAEDHVFSF DLVNINRDVK QIAWPATPSK RDECKWAGKD LRKDCSNFVR 120
  121 VLQSYNQTHI YICGTGAFHP ICSFLEMGKR AEDNIFRLDA NYFENGRGKS PYDPKMQSSS 180
  181 LLLDGELYSG TSADFMGRDF AIFRTLGSHH PIRTEQHDSR WLNEPRFLGI HLIPESDNPE 240
  241 DDKIFLFFKE NAMDGEHTGK ATISRIGQLC KNDMGGHRSL VNKWTTFLKA KLTCSVPGLN 300
  301 GIDTHFDELQ DVFLMSAKDP KNPVIYAVFT TSSNIFRGSA ICMYSMADIR RVFLGPYAHR 360
  361 DGPNYQWVPF QGRVPYPRPG TCPSKTFGGF DSTKDLPDDV ITFARLHPAM YNPVQPMGGK 420
  421 PIVVRTNVEY QFTQLVVDRV EAEDGQYDVM FIGTDLGTVL KVVTIPRESW HDLEEVVLEE 480
  481 MTVFREPTPI TAMELSTKQQ QLYLGSDLGI SQMPLHRCEV YGKACAECCL ARDPYCAWDG 540
  541 TECSRYFPTA KRRTRRQDIR NGDPLSQCSD LHHNDDLEGY SSVEERSVYG VENSSMFLEC 600
  601 SPKSQRALIY WQLQKPNDER KHEIVIDERL SLTGQGLLIR SLTQADSGVF LCHAVEHGFI 660
  661 QPLRRINLQV IPSQRVGELL LRAGTNDKDP APKHKLWYRD FMSLLEHPDL NSVDEFCERI 720
  721 WKREKKPKGK KAPKVNPGTG VSIKNEKTPQ TTAQSLQNPT QRAQNAPKVP NNPSVQIFPK 780
  781 STGLQRSQSP GGTVSTESQS TKPDTQKASE SQRAQPNQAK KGPQTPQRGP PHTAKWKQLQ 840
  841 ENKRGRNRRT HEQQRPPRSV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle