YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SGS3_DROER
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTIATALV GILLIACAHV ANGSDCGCPK RTTPKPCTTA RPTCAPVTTT TCRPPTTTRC  60
   61 PPPTTTRCPP PTRPAECTAT TKRPTARPTT RRTTVRATTK RATTRRTTKR ATTRRTTVRA 120
  121 TTKRATTRRT TTKRAPTRRT TTKRATTRRN PTRRTTTRRA PTKRATTKRA TTRRNPTKRK 180
  181 TTRRTTVRAT KTTKRATTKR APTKRATTKR APTKRVTTKR APTKRATTKR APTKRATTKR 240
  241 APTKRATTKR APTKRATTKR APTKRATTKR ATARPTSKPC GCKPCGPGGE PCQGCAKRDA 300
  301 LCQDLNNILR NLERKVRQCV CGEPQWLL

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	328	0.99