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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SHH_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLTRVLLV SLLTLSLVVS GLACGPGRGY GRRRHPKKLT PLAYKQFIPN VAEKTLGASG  60
   61 RYEGKITRNS ERFKELTPNY NPDIIFKDEE NTGADRLMTQ RCKDKLNSLA ISVMNHWPGV 120
  121 KLRVTEGWDE DGHHFEESLH YEGRAVDITT SDRDKSKYGT LSRLAVEAGF DWVYYESKAH 180
  181 IHCSVKAENS VAAKSGGCFP GSALVSLQDG GQKAVKDLNP GDKVLAADSA GNLVFSDFIM 240
  241 FTDRDSTTRR VFYVIETQEP VEKITLTAAH LLFVLDNSTE DLHTMTAAYA SSVRAGQKVM 300
  301 VVDDSGQLKS VIVQRIYTEE QRGSFAPVTA HGTIVVDRIL ASCYAVIEDQ GLAHLAFAPA 360
  361 RLYYYVSSFL FPQNSSSRSN ATLQQEGVHW YSRLLYQMGT WLLDSNMLHP LGMSVNSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle