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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|206746096, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTNSYKKV IAGTMTAAMV AGVVSPVAAA GKSFPDVPAG HWAEDSINYL VDKGAIVGKP  60
   61 DGTYGPTESI DRASAAVIFT KILNLPVDEN AQPSFKDAKN LWSSKYIAAV EKAGVVKGDG 120
  121 KDNFYPEGKI DRASFASMLV GAYNLKEKVD GTLVTKFDDL RGHWGEEKAN ILVNLGISVG 180
  181 TGGKWEPNKS VSRAEAAQFI ALTDKKYAKP ENSDAKVTNV AATEPTQLTL TGTGLNKLTA 240
  241 EDVTLEGNKA IALEASKDGK SAVVTLSGKI APNKELPVKV KGNTFIVKYV YEVKKLRVEQ 300
  301 LTFDDDRADQ AVVFKLNDEK GNADIEYLDI AGHDVKFVAN NLDGTPANIF EGGTAESTTG 360
  361 KLAVGIAEGK YKVEVQVTKR GGITVSNTGI IEVKNLDAEA TAIKDVVFAV DTDKAGVNYA 420
  421 KPLSGTDFTL NSKTLVAGEK AGIHKVVAQI NKENKVVDPS AISLKSSNPG VISVKNGEIK 480
  481 AEAAGSATLT VKVGDVTKTF DFVVKTDTRK LTTVKANPDQ LKVVDGKELP VTFVTTDQYG 540
  541 DPFGANSGAI KEVFPQTGVV KVLDVTTTNE GSIGTSSIKV KGENVGAGTI HFQNPNASGE 600
  601 GYGSLHVEVT KSNIGHEAPR LELVSKAGQK GEAADTTLGA GNTVAYQLSN YTTEGVYADA 660
  661 ADLAGYEFRV GNDKIASAKI EGKTLKVTGK TAGVTDVILT KDGATAGHAT ITVTQENIQI 720
  721 TSVKFKDVEV EQFENRKVNI DRVLDVVKSD KDDVLNGIKL NISTEHKVRI VDEGTEQGKV 780
  781 YLDRNDNATF DGNDVALGYV TAVKSNDTVS KEGNDLFKFL TDETATNKND VFKGVTTAFG 840
  841 DKGTVIFKVM KDRVAPTTEY GTKAVTINVI KEEI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle