YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIMP3_CHICK
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAWLGFLAV FLCSWSLRDL VAEACTCVPI HPQDAFCNSD IVIRAKVVGK KLMKDGPFGT  60
   61 MRYTVKQMKM YRGFQIMPHV QYIYTEASES LCGVKLEVNK YQYLITGRVY EGKVYTGLCN 120
  121 WYEKWDRLTL SQRKGLNHRY HLGCGCKIRP CYYLPCFATS KNECIWTDML SNFGHSGHQA 180
  181 KHYACIQRVE GYCSWYRGWA PPDKTIINAT DP

Type	Start	End	Confidence
Signal Peptide	1	24	0.92
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	212	0.99