YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|152968936, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTLLAAGA VVALSTTFAA GAAENDKPQY LSDWWHQSVN VVGSYHTRFG PQIRNDTYLE  60
   61 YEAFAKKDWF DFYGYIDAPV FFGGNSTAKG IWNKGSPLFM EIEPRFSIDK LTNTDLSFGP 120
  121 FKEWYFANNY IYDMGRNDSQ EQSTWYMGLG TDIDTGLPMS LSLNVYAKYQ WQNYGASNEN 180
  181 EWDGYRFKVK YFVPLTDLWG GSLSYIGFTN FDWGSDLGDD NFYDLNGKHA RTSNSIASSH 240
  241 ILALNYAHWH YSIVARYFHN GGQWADDAKL NFGDGPFSVR STGWGGYFVV GYNF

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	294	0.99