YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VPI_HAEIN
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAEKTSLAV LTAQLTSPDG WQQLLPKGEF RSRDGSPTDV AHWFIDGTIA QNLIHKARQL  60
   61 NQDLLVDYDH ETILKAKKGI DAGNVVAAGW FNADEIQWFD DETRQGLYIK PRWTPKAYQQ 120
  121 IKDGEFAFLS AVFPYDENGT PLELRMAALT NDPGITGMQR LAVLSATLNP QENVKMPESL 180
  181 RKLLAKLGVE IAEGVELTEE QANTALNALE TLQTDKTKAD EQVATLSAKN TEVDLSQYVP 240
  241 KATYDAVMSQ VAVLSAKTDD VEIDNHISKA RNEGRAVEAE VEYLKQFGKQ QGVAALSAML 300
  301 EKRPQIAVLS AQQTQTTKVE KPVEKGTAVL SAADKEAAKL LGISEQDYAK ELEAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle