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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y2090_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARSLWRTR TKLLVVGTAL CGGSGAAFIA SSDDPSTTLK LCTSIPVRLY RNTVTAASIA  60
   61 FDYEYSLLGL AEGSSERAKV KHEVHLRSAQ KLQELCFKNG GIYIKLGQHI GQLEYLVPEE 120
  121 YVRTMRESML NKCPISSYEQ VCEVFKKEVG EMPDQVFAEF DPVPIASASL AQVHVARTHD 180
  181 GKKVAVKVQH AHMTDTAAAD TAAVGVLVNT LHRIFPSFDY RWLLDEMSES LPKELDFLVE 240
  241 AKNNEKCLDN FRKLSPHIAE YVYAPTIYWN LSTSKLLTME FMDGAQVNDV DKIRKLGIQP 300
  301 YEVSKLVSQT FAEMMFKHGF VHCDPHAANL IVRPDPSGKR NIYGKRKPQL VILDHGLYKE 360
  361 LDFNTRFNYA SLWKALVFSD AKAIKEHSEK LGAGDDLYVL FAGILTMRPW KQVIDTSVDH 420
  421 LVIQGNKEDV SELQMYASQY FSEISELLRR LPRVILLMLK TNDCLRSVNN ELMQGSSLES 480
  481 FLIIGKVSSQ AVLEAKRAEK KSLMKWLKVW FEGFSVEARL WVMQFALWIL QVRKSLTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle