YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|218553444, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDETLGFFK KTSSSHARLN VPALVQVAAL AIIMIRGLDV LMIFNTLGVR GIGEFIHRSV  60
   61 QTWSLTLVFL SSLVLVFIEI WCAFSLVKGR RWARWLYLLT QITAASYLWA ASLGYGYPEL 120
  121 FSIPGESKRE IFHSLMLQKL PDMLILMLLF VPSTSRRFFQ LQ

Type	Start	End	Confidence
Cytoplasmic	1	18	0.95
Transmembrane Helix	19	38	0.90
Non-Cytoplasmic	39	62	0.82
Transmembrane Helix	63	84	0.92
Cytoplasmic	85	94	0.80
Transmembrane Helix	95	115	0.91
Non-Cytoplasmic	116	139	0.84
Transmembrane Helix	140	159	0.76
Cytoplasmic	160	162	0.82