YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238902807, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSRRVIHH GLYFAVLGPL IGVLFLVLYI FFAKEPLVLW VIIHPIFLLL SITTGAIPAL  60
   61 LTGVMVACLP EKIGSQKRYR CLAGGIGGVV ITEIYCAVIV HIKGMASSEL FENILSGDSL 120
  121 VVRIIPALLA GVVMSRIITR LPGLDISCPE TDSLS

Type	Start	End	Confidence
Cytoplasmic	1	10	0.91
Transmembrane Helix	11	33	0.93
Non-Cytoplasmic	34	40	0.91
Transmembrane Helix	41	69	0.81
Cytoplasmic	70	80	0.90
Transmembrane Helix	81	102	0.94
Non-Cytoplasmic	103	118	0.86
Transmembrane Helix	119	139	0.83
Cytoplasmic	140	155	0.92