YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YPI3_VIBAL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSMSFLIST LFDLYIMVVI LRIWLQAARA DFYNPFSQFI VKATQPVIGP LRRIIPSVGN  60
   61 IDLATVLFAY VLCVLKFVVL ILIASNGSVS FSADFLFLGL LSLIKAAGGL LFWVLLIRAI 120
  121 LSWVSQGRSP IEYVFHQLTE PMCAPIRRII PAIGGLDLSV LVLFIGLQFA NFLMGDIIGP 180
  181 IWFQL

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.65
Transmembrane Helix	6	25	0.85
Cytoplasmic	26	60	0.77
Transmembrane Helix	61	84	0.87
Non-Cytoplasmic	85	94	0.73
Transmembrane Helix	95	117	0.88
Cytoplasmic	118	151	0.79
Transmembrane Helix	152	173	0.85
Non-Cytoplasmic	174	185	0.74