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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7491894, gi|3...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQADNENSDA KAHQPQHSPQ HSTENQGHTG TSDTSSLEME LSKLHPESKQ RQLPHSPEHE  60
   61 RSRSPIASVV SYRSHMTLED ENQIFNAEMA VRGSQSLQRR PTGRSVRGSM RRLSSHRSKS 120
  121 MRTSKSKKSG DYERTAENEE AAQEAENHLD NFGVVTFGTE APIKAPDHPV TIFGRIFKFI 180
  181 QQRSFYLRSL IYIIPLGVLL LIPVFIGRFY HPQPPYRDEL GHEYERHLHV GGVDLMWMAI 240
  241 WWEIIWLSIW AARYAAKVIP YFFAFFVSFI SNNVTKWRCM AVALEFPITL FLWMLAVYVS 300
  301 FLPIMTRRHI GDYGVPDHVR VKLPWQQSAN NVLITLFITS IMNLVEKVLM QLIAMSLHRR 360
  361 EYESRILYNK FAINELARLY GYARQRSFDF KDAIHRAQAD VFKFADHQHG KKRAAAARVA 420
  421 QNALNKTTYK AISAFNFATD MVNKVAGEIT NREVEKSSSP KSVVLHLLKT TRGCQSLARC 480
  481 LFEALVNPEN PDLVLDDFIP VYTDETGEVD NATLEACYSI FDRDLNGDIT CEEIELACVE 540
  541 IGKERKSISA SLRDLNDSIS KLDGICMFIV AVITLFIFLY LIARNFSGVL TSAGTTLLGL 600
  601 SWLFSGSAQE LLSSIIFVFV KHPYDVGDRV DVMINGTVTS AMVKEISIMS TEFRLLTGKV 660
  661 IQAPNSLLNT LWILNMRRSD GIADPVTVNL KFGTTLQQIE QLRIKIIDFL KEEKRDYKPD 720
  721 LLTEVTDLPD LYSMSLCVVF FHKYNFQDEV LRMRRRNMFM CALMTYMQEL DIVSPIFNSP 780
  781 GKSKDSPMYV NFNNGSMEGV KLSGGNDGGG TENHRDSTVG GGILKNPKAY PYREPTPPGS 840
  841 SDSDTASVSK KRVDFSLGTR HLMPAFDDVA DIGSKRLGRD SLPDAVIENA GTEAMRREAE 900
  901 ERRRAEEEEY ERSQQESSSN EENENASRTS GARFSFSSKA SRLSARPSAR TVPPLQHISI 960
  961 QDLREPNENN TSKSARL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle