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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58004752, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPWVFCLL LFPCSSAYSD SWMPLVNLTQ HLLQEANSSF SSNCWVCLSI QTQRSLAMPA  60
   61 PLRTWTETPM KLRIMYSART LSGPYPITDL ERRLQNFQPL TPHSSFVNPD QRAIAFLQIT 120
  121 SVTGILPILS RITSVRYPDD HVYESAQRPI WGSLSTQTIL TSQAPLCISR FFKNSNHATF 180
  181 VGKLPASLCN HTFQLSPSAN HQSIDLSSSY AFAPLMAMPG SKWRNPLRFS GPPSLNSGMP 240
  241 HYSCPIDDIH CHTYPTTPWR SCPSFPASTC YNLTLFEPDN SSHPITLSVD TTYFKIKLQG 300
  301 HKDPYPLFQY QPLMGAALSG QYSIWEYEPT VKKNGGITPN IFSHLVSLTY SFCLNSSGVF 360
  361 FLCGNSTYVC LPANWSGVCT LVFQYPDIEL LPNNQTISVP LFATVPSSVP ASRRKRALPL 420
  421 LPLLAGLGIA SALGLGIAGI TTSTVYFQQL SKALSDSLDE IATSIISLQD QIDSLAGVVL 480
  481 QNRRALDLIV AERGGTCLFL QEECCFYINQ SGVVRHAARK LRERASELGT SSSSWIQWLG 540
  541 LGPWLPSWLT SLMAPILFIL VLLVFRPCLL NCLTHSVSRR MSSFIHTTTE GHVDKILLLR 600
  601 ESQYKRLPQE PPEEDAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle