YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Gr59a-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRIGQAYNV YAVFIGMTSY ETMGGKFRQS RITRIYCLLI NAIFLTLLPS AFWKSAKLLS  60
   61 TADWMPSYMR VTPYIMCTIN YAAIAYTLIS RCYRDAMLMD LQRIVLEVNR EMLRTGKKMN 120
  121 SLLRRMFFLK TFTLTYSCLS YILAVFIYQW KAQNWSNLCN GLLVNISLTI LFVNTFFYFT 180
  181 SLWHIARGYD FVNQQLNEIV ACQSMDLERK SKELRGLWAL HRNLSYTARR INKHYGPQML 240
  241 AMRFDYFIFS IINACIGTIY STTDQEPSLE KIFGSLIYWV RSFDFFLNDY ICDLVSEYQM 300
  301 QPKFFAPESS MSNELSSYLI YESSTRLDLL VCGLYRVNKR KWLQMVGSIV VHSSMLFQFH 360
  361 LVMRGGL

Type	Start	End	Confidence
Cytoplasmic	1	31	0.91
Transmembrane Helix	32	53	0.91
Non-Cytoplasmic	54	70	0.90
Transmembrane Helix	71	90	0.94
Cytoplasmic	91	126	0.95
Transmembrane Helix	127	148	0.93
Non-Cytoplasmic	149	160	0.79
Transmembrane Helix	161	180	0.91
Cytoplasmic	181	341	0.80
Transmembrane Helix	342	362	0.71
Non-Cytoplasmic	363	367	0.80