YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG1271-PC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.16
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWFSYALFL LTRQSRFLAG SVLQLMNGQV TPRLLFEIMN NKKLKQALMQ KKARVELLDS  60
   61 WILHKLRTGS SRDKDVEHIT DVTSSTATGL YDPFTLSWSP LISWLFGINS KILPRVVDNG 120
  121 YKGFGHVHPT AFGPDWANTE IPIAASLSDQ TAAIWGSQCF QKNDVKVTMG TGAFLNLVTG 180
  181 DRCQAVISGM YPLVAWQFKK PTRQQGAVYC IEGASHDFGT VVTWAQSCEL FDSPANTSDI 240
  241 AQSVPDTNDV FFMPAFSGLG PPVNDYRSAS GFIGLTPSTT KAHMVRALLE SIVFRLVQLI 300
  301 EAAEKETSQK LHMIRYFCLS ILTNFTLHLF SSILGLMAAS PAMTSSANSL RISADCGWSG 360
  361 RTMRRAASWE PRSWRASTSE SGAM

Type	Start	End	Confidence
Signal Peptide	1	19	0.41
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	384	0.62