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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG4829-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSTACGVGA SATNLSTLQS SITIPAGSAG TGTGAGASAA ADAHKMVHHS NEDAMNKIPL  60
   61 KSAGGLDSDE EKNGGELMQD TAAAEEARRE QMRVKVLAWM KKLTIVLICF IGIALISYVI 120
  121 ISLCFSDWPK STPNRNNTTT ATTTTATPTT ISTEATITTI APSGLATTIS TSTTTIATSA 180
  181 TQQPPTATTT TTATRTTTTS RTDSNPSPTP KTFHLTDDEQ QQEPETETDN IGNLNLGITS 240
  241 TATTPSDDVL PNVAASTAAT TAAPPTWLAD QIKIDTSEQY NSILGVYQHG AVSSDNLECS 300
  301 KIGSGILQKN GSAVDAAIAA LLCNGLLTLQ SMGIGGGHLM NVYNRKERHA TAIDAREVAP 360
  361 YEATEDMFAQ QPENSDKGPL SIAVPGEVMG YHVAHQKFGQ LPWAELVAPS LELCEKGYHV 420
  421 SQHMERALDI ALPYIKEHEQ YQIYLNAETG KPHVAGTVVK PPKNLCKTYK LLAENGPMDM 480
  481 YNGTIAKLLA EDLQDMGSII LADDLESYEA DVINSITMDL GDDTLYVVPP VSSGSVVAHV 540
  541 LAILQGYNFT AQDLSTEELK ARTIHRFAEA MKFAFAQRPE LGDMHFIDAR ELVSRLNSPD 600
  601 FGDQNRAKIN DSHVLPDAQA YGANFAAIED LDGTSNLVVL APNGDAVSVT SSINSYFGSG 660
  661 LIGPRTGIVL NNGMNDFAVK NNIFALPQSQ SNKIEAHKRA MSSQSPILLA DKDGNMKMVI 720
  721 GAAGGSKIIP AVVEVAANVL WFGKDLRQAV DAPRFYHQLM PDVLEYEEDG FTESLLQLLT 780
  781 KRGHKLKSIS VKTGSVVTAI SRNATAIYAN ADYRKRGGVA GF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle