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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG33310-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDYDRSSED VPEKKLSWEP DSTLRRRFVS NNEYHSSLEG EEEEIDLDSV GSSTMRGSYR  60
   61 MPQNAEDERP VILAEIINMG KLKELKEQRE STNVFRNNRR DDKTIDEVKG SKITGTSKQH 120
  121 VEEVKYNETA SNEDDDNAQV KHIGTITKIF SIAQRMKEKK SSKESEEDEN KDENKDVKKD 180
  181 ENKDDEQKLP PEPEIELEAK KAWTFPIAET SPDIPGENQI LQEYQKVKIG KRNRKYRCIG 240
  241 INTDISRKSK IKTFISKSAG DDLVVYHDGG RLRDIGQTTE NLKNQRKNHK HKTEPDDIPV 300
  301 DIGHSDDRVR EIGVNTKKLP KIIIPPIAEM HVHKNGKLRD IGTSTDKPFW PIDDGTDVIY 360
  361 MHPIKTDRKK LNKLIVDPPP DNGPYKMPTK EDRRTYYKGC EYHFPGRTEW RRLFFNKIHG 420
  421 KYKLRRPSHW LYTLVFSVLY ILFVIIFSMA WFDFIKDDAS RKVPMIKMAQ PFISFTPIGP 480
  481 RTNPKAVSFD PRNSTEVMEK YAGIMALLEK YGDYGHNPRF GTCTANEKFG YPSGEPCVFL 540
  541 KVNRIIGFKT EPYINSDELV KAKIDEVEFT ALKRLLENTT TEEGHLNRTW ITCRSDKDKN 600
  601 VLIEFHPEPA IRTEYTDIEE KIEYIANEGK KSFFGPNDVN RIVALKIKNL KANERVHINC 660
  661 KMWAQNIHHR KEGYGQVSFF VLLATNENRE RVEKLLRTDY SL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle