YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG7881-PA, FBpp0...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	17	0.88
Transmembrane Helix	18	41	0.85
Non-Cytoplasmic	42	61	0.91
Transmembrane Helix	62	83	0.86
Cytoplasmic	84	90	0.79
Transmembrane Helix	91	111	0.91
Non-Cytoplasmic	112	117	0.69
Transmembrane Helix	118	137	0.84
Cytoplasmic	138	152	0.80
Transmembrane Helix	153	175	0.89
Non-Cytoplasmic	176	182	0.83
Transmembrane Helix	183	203	0.94
Cytoplasmic	204	241	0.90
Transmembrane Helix	242	260	0.77
Non-Cytoplasmic	261	285	0.78
Transmembrane Helix	286	307	0.88
Cytoplasmic	308	324	0.75
Transmembrane Helix	325	343	0.85
Non-Cytoplasmic	344	349	0.68
Transmembrane Helix	350	374	0.87
Cytoplasmic	375	383	0.68
Transmembrane Helix	384	407	0.89
Non-Cytoplasmic	408	415	0.70
Transmembrane Helix	416	437	0.92
Cytoplasmic	438	482	0.77

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDNEKGPVI GIRHMQALLL FLAIVVNYTA RLSVSVAIVA MTDAATTNLD FPEYNWNGVQ  60
   61 QSYILSSFYW GYIVTQFPAG FLVRRFGAKA VLLVPTLATA VLSGLTPYCV AWGGWQAFCT 120
  121 IRIVEGLFQG LIFPCIHEHL AKWSPPEDRN RLGAFAYSGA DCGSVLAMAS SGLIANGSMG 180
  181 WPGIFYVSAG TCGLWCLLWV LFGANNAPSS RLIGSREREH IERSMKRQDG FHAQKIPIPW 240
  241 RAIWSSSPFY ALLVVRSAQG WANSTMQLQT PSYMHGVLEM DIKSNALYSA LPFLAMWGMS 300
  301 YVYLVFADVA MSRQWMSLTT LRKSINTVSY WGPAAALIGI GFLDKSQTTL AIALMTINAG 360
  361 LNAGSGIGSI LTIIDMSPNH SGMLMAIVNG IGNIFPLLTP LLVGVIVTES DSRSQWQIVF 420
  421 AMTAVVFFIG NLVYLIWGTT DQQAWDAEDY LQAKDPESES NAHQMEFKSR TDSEAKADIK 480
  481 AE