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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: santa-maria-PA, ...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTQNSAMWG QKSNRKLIIG IFGFCLGLFG ILCGMFWVDL FDWIMHKEMA LAPDTRVYEN  60
   61 WKSPPIDLSL DIYLYNWTNP EDFGNLSTKP ILEQVGPYRF IERPDKVDIH WHPENASVTY 120
  121 RRRSLFYFDA AGSNGSLDDE ITTLNAVALS AAATAKYWPP VKRSLVDVGL KMYGAEMSVQ 180
  181 KSIDELLFTG YNDAMIDVAM AMPIFGDEVK VPFDKFGWFY TRNGSADLTG VFNVFTGADQ 240
  241 LAKLGQMHSW NYQENTGFFD SYCGMTNGSA GEFQPQHLKP GDSVGLFTPD MCRTIPLDYV 300
  301 ETVDIEGLEG YKFSGGPRSV DNGTQYPENL CFCGGQCVPS GVMNISSCRF GSPVFMSYPH 360
  361 FFNADPYYPD QVEGLSPNQK DHEFYMVVQP STGIPLEVAA RFQVNMLVEP IQGISLYTGI 420
  421 PRIFFPLVWF EQKVRITPDM ADQLKVLPIV MLSGHIFAGI CLIVGITLLC WTPVQILLAS 480
  481 CRNRRYDLRT KTKTNGQYKS RSQFSSAEEL KSKASTLVCE KSVKGSPDSS PLLEKGRKPT 540
  541 IIKSQTGESV ATASTAISDN KQD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle