YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157170414
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPSSRRFK SPTTLAFFLV GVTLVVLNQW FLQEHRQEKA KGPVATRRSL AAVVQRSPLF  60
   61 QVPPCVANAS ANLLTGFQLL PARIQDFLRY RHCRRFPQLW DAPPKCAGPR GVFLLLAVKS 120
  121 SPAHYERREL IRRTWGQERS YSGRQVLRLF LVGTSPPEEA AREPQLADLL SLEAREYGDV 180
  181 LQWDFSDTFL NLTLKHLHLL DWTAEHCPGV SFLLSCDDDV FVHTANVLSF LEVQSPEHHL 240
  241 FTGQLMVGSV PVRESGSKYF VPPQIFPGVA YPAYCSGGGF LLSRYTVRNL RSAAHHVPLF 300
  301 PIDDAYMGMC LQQAGLAPSS HQGIRPFGVQ LPNVQRLSLD PCMYRELLLV HRFAPYEMLL 360
  361 MWKALHNPAL HCSHKQVAGS PTAGEQNPDA H

Type	Start	End	Confidence
Signal Peptide	1	28	0.75
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	391	0.95