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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6755602, gi|2...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNCTIKSEE KKEPCHEAPQ GAAPAVETQP GDPAPASQDA ATAKAPPQDC ASPESSGSPE  60
   61 PKRPAASEAA SGSQERLDFN RNLQEVVPAI EKLLSSDWKE RFLGRSNVEA KDVKGTQESL 120
  121 AEKELQLLVM IHQLSALRDQ LLTAHSEQKN MAAMLFEKQQ QQMELARQQQ EQIAKQQQQL 180
  181 IQQQHKINLL QQQIQVNMPY VMIPAFPPSH QPLPVTPDSQ LALPIQPIPC KPVEYPLQLL 240
  241 HSPPAPVVKR SGVAAHHPLQ EPPQPLNLTA KPKVPELPNT SSSPSLKMNS CGPRPASHGA 300
  301 PTRDLQSSPP SLPLGFLGEG DAVTKAIQDA RQLLHSHSGA LENSPNTPFR KDLISLDSSP 360
  361 AKERLEESCV HPLEEAMLSC DMDGSRHFSE SRNSSHIKRP MNAFMVWAKD ERRKILQAFP 420
  421 DMHNSSISKI LGSRWKSMTN QEKQPYYEEQ ARLSRQHLEK YPDYKYKPRP KRTCVVEGRR 480
  481 LRVGEYKALM RTRRPGCSPK LHHPVSRPSL VARGGLWLLP QAGQAQVSSD ILFPRAAGLP 540
  541 LARPLVEHYD PQGLDPNMPV IINTCSLREE GEGTDDRHSV ADGEMYRYSE DEDSEGDEKS 600
  601 DESWWYSQTD PQLAGPARHR WGKDLVPIRT AQPDLPELSW YLDLGVGQVM GETALVDTFP 660
  661 RWGSSSSSHL WAHRRCQWPG WVGVMWPWWT KLAEGFSPWD NGQGPLDVFP SVCPPIQGDG 720
  721 RDTPAPLRSH ALFPFLPGPD QPLWDSTPAL QAPRSPLCHL GYFELCSLAV LVFVFQVHVP 780
  781 LATVCLCEAH TCSSRHSWQK AFAECHCEPG TPVSSVMCVL MLLWGLLLCS FVPKLLPLCQ 840
  841 SGVSGSVYFL PMYTSPSSSS VCPCSHHTRC ILWVFVGPSL PLGLAVPDPH DPFPPFRLCQ 900
  901 SVPTEPFLAP RTVRASPGLQ GGSALIPNVC AAVMRIFFSV TALQRGPHGS WSPSLLHELR 960
  961 VASSPPPSPP KLASWLYPKE IIST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle