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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34328180, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSCWDTAVL PYALLGCLLL TGYGSGSKLK VPELSLKGTQ HVMQAGQTLF LKCRGEAAHS  60
   61 WSLPTTVSQE DKRLSITPPS ACGRDNRQFC STLTLDTAQA NHTGLYTCRY LPTSTSKKKK 120
  121 AESSIYIFVS DAGSPFIEMH TDIPKLVHMT EGRQLIIPCR VTSPNVTVTL KKFPFDTLTP 180
  181 DGQRITWDSR RGFIIANATY KEIGLLNCEA TVNGHLYQTN YLTHRQTNTI LDVQIRPPSP 240
  241 VRLLHGQTLV LNCTATTELN TRVQMSWNYP GKATKRASIR QRIDRSHSHN NVFHSVLKIN 300
  301 NVESRDKGLY TCRVKSGSSF QSFNTSVHVY EKGFISVKHR KQPVQETTAG RRSYRLSMKV 360
  361 KAFPSPEIVW LKDGSPATLK SARYLVHGYS LIIKDVTTED AGDYTILLGI KQSRLFKNLT 420
  421 ATLIVNVKPQ IYEKSVSSLP SPPLYPLGSR QVLTCTVYGI PRPTITWLWH PCHHNHSKER 480
  481 YDFCTENEES FILDPSSNLG NRIESISQRM TVIEGTNKTV STLVVADSQT PGIYSCRAFN 540
  541 KIGTVERNIK FYVTDVPNGF HVSLEKMPAE GEDLKLSCVV NKFLYRDITW ILLRTVNNRT 600
  601 MHHSISKQKM ATTQDYSITL NLVIKNVSLE DSGTYACRAR NIYTGEDILR KTEVLVRDSE 660
  661 APHLLQNLSD YEVSISGSTT LDCQARGVPA PQITWFKNNH KIQQEPGIIL GPGNSTLFIE 720
  721 RVTEEDEGVY RCRATNQKGA VESAAYLTVQ GTSDKSNLEL ITLTCTCVAA TLFWLLLTLF 780
  781 IRKLKRSSSE VKTDYLSIIM DPDEVPLDEQ CERLPYDASK WEFARERLKL GKSLGRGAFG 840
  841 KVVQASAFGI KKSPTCRTVA VKMLKEGATA SEYKALMTEL KILTHIGHHL NVVNLLGACT 900
  901 KQGGPLMVIV EYCKYGNLSN YLKSKRDLFC LNKDAALHME LKKESLEPGL EQGQKPRLDS 960
  961 VSSSSVTSSS FPEDRSVSDV EGDEDYSEIS KQPLTMEDLI SYSFQVARGM EFLSSRKCIH1020
 1021 RDLAARNILL SENNVVKICD FGLARDIYKN PDYVRRGDTR LPLKWMAPES IFDKVYSTKS1080
 1081 DVWSYGVLLW EIFSLGGSPY PGVQMDEDFC SRLKEGMRMR TPEYATPEIY QIMLDCWHKD1140
 1141 PKERPRFAEL VEKLGDLLQA NVQQDGKDYI PLNAILTRNS GFTYSTPTFS EDLFKDGFAD1200
 1201 PHFHSGSSDD VRYVNAFKFM SLERIKTFEE LSPNSTSMFE DYQLDTSTLL GSPLLKRFTW1260
 1261 TETKPKASMK IDLRIASKSK EAGLSDLPRP SFCFSSCGHI RPVQDDESEL GKESCCSPPP1320
 1321 DYNSVVLYSS PPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle