YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PIGH_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDEKSFSDI CGGRLALRCR YYSPYCREFG LSSARLSLCS LTAVTCAVWL AAYGLFTLCE  60
   61 NSMVLSATIF ITILGLLGYL HFVKIDQETL LIIDSLGIQM TSSYASGKES TTFIEMDKVK 120
  121 DIIINEAIYM QKVIYYLCIL LKEPGKPHEI SRVVPVFQSA KPRLDCLIEV YRSCQEVLAH 180
  181 QKATATSL

Type	Start	End	Confidence
Cytoplasmic	1	35	0.92
Transmembrane Helix	36	56	0.92
Non-Cytoplasmic	57	62	0.81
Transmembrane Helix	63	83	0.94
Cytoplasmic	84	188	0.94