YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34872339, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALRSWMTR SVTFLFRYGQ RFPVSANSKK RCFSELIRPW HKTMLTGFGV TLCAVPIAQK  60
   61 SEPQSLSNEA LMRRAVSLVT DSTSTFLSQT TYALIEAITE YTKAVYTLVS LYRQYTSLLG 120
  121 KMNSQEEDEV WQVIIGARVE MTSKQQEYLK LETTWMTAVS LSEMAAEAAY QTGADQASIT 180
  181 ARNHIQLVKS QVQEVRQLSQ KAETKLAEVQ TQELRQKTQE ASDEAADQEE EAYLRED

Type	Start	End	Confidence
Cytoplasmic	1	38	0.54
Transmembrane Helix	39	58	0.52
Non-Cytoplasmic	59	237	0.99