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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27716135, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.82
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGLGACNLT GVTLIVLLLP RSLEGCGQIR ISPPIVHLGD PVLASCTISP NCSKLDRQPK  60
   61 ILWRLQDEPN QPGDRQHHLP DGSQESIITL PHLNYTQAFL FCLVPWNNSF QVLDQAELRA 120
  121 GYPPASPSNL SCLMYLTTNS LVCQWEPGPE THLPTSFILK SFRSRTGCQY QGGTILDCMP 180
  181 KKRHSNCSIP RKHLLLYQNM VIWVQAENML GSSESPKLCI DPMDVVKLEP PMLQALDIGH 240
  241 DIVSRQPGCL WLSWKPWKPS EFMEQECELR YQPQLEGANW TLVSHLPSST DRFELCSLHQ 300
  301 APVYTLQLRC IRSSLPGLWS SWSPGLQLRP TIKAPTIRLD TWWQKKHLDP ETVRMQLFWK 360
  361 PTPLQKDSGQ IQGYLLSWSC PDGQGRIMHL CNTTELSCTF HLPSEAQNVT LVAYNSAGTS 420
  421 SPTLVVFLEH EGPAVTSLHA MAQDLGSIWV DWEAPSLLPQ GYLIEWGPDS HKYSNNSWRI 480
  481 EPNGNTTGIL LEDNIHPFQL YRITVAPLYP GTVGPPVNVY TYSGEKALPH APELYLKHVG 540
  541 RTWAQLEWVP ETPWLGMIPL TNYTIFWTDA RDHSFSVTLN ISFHDFVLDH LKPASLYHVY 600
  601 LMATSRAGST NSTGLTLMTM ALDSSDVNIF LGILCFVLLS ITCATAWFCC KQSRKTFFWP 660
  661 NVPDPAHSSL SAWVPTIMTE ETFQLPSFWG SSVPSITKIT ELEEDKKPTH WDPSESSGTG 720
  721 SLPAVVQAYV LQGDPREISN QFQPPSSTND QVLYGQVLGS PTSPEVVGYL RCDSTQPLLG 780
  781 GPTPSPKSYE NIWFHSRPQE TFIPQPPSQE DDCVFGPPFD FPLFQGLQVH GVEEQGGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle