YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47078278
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKFCTGGE AEPSPLGLLL SCGSGSAAPA PGVGQQRDAA SDLESKQLGG QQPPLALPPP  60
   61 PPLPLPLPLP QPPPPQPPAD EQPEPRTRRR AYLWCKEFLP GAWRGLREDE FHISVIRGGL 120
  121 SNMLFQCSLP DTTATLGDEP RKVLLRLYGA ILQMGAEAMV LESVMFAILA ERSLGPKLYG 180
  181 IFPQGRLEQF IPSRRLDTEE LSLPDISAEI AEKMATFHGM KMPFNKEPKW LFGTMEKYLK 240
  241 EVLRIKFTEE SRIKKLHKLL SYNLPLELEN LRSLLESTPS PVVFCHNDCQ EGNILLLEGR 300
  301 ENSEKQKLML IDFEYSSYNY RGFDIGNHFC EWMYDYSYEK YPFFRANIRK YPTKKQQLHF 360
  361 ISSYLPAFQN DFENLSTEEK SIIKEEMLLE VNRFALASHF LWGLWSIVQA KISSIEFGYM 420
  421 DYAQARFDAY FHQKRKLGV

Type	Start	End	Confidence
Signal Peptide	1	27	0.92
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	439	0.98