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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46237594, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGPQLCLVL LVLGLSSGGV SATPVLEARP QVSCSLEGVE IKGGSFQLLQ DGQALEYLCP  60
   61 SGFYPYPVQT RTCKSTGSWS VLQTRDQKIV KKAECRAIRC PRPQDFENGE FWPRSPYYNL 120
  121 SDQISFQCYD GYTLRGSANR TCQENGRWDG QTAICDDGAG YCPNPGIPIG TRKVGSQYRL 180
  181 EDTVTYHCSR GLVLRGSQQR RCQEGGSWSG TEPSCQDSFM YDSPQEVAEA FLSSLTETIE 240
  241 GADAEDGHSP GEQQKRKIIL DPSGSMNIYM VLDGSDSIGA SNFTGAKRCL ANLIEKVASY 300
  301 GVKPRYGLVT YATVPKVLVR VSEERSSDAD WVTEKLNQIS YEDHKLKSGT NTKKALQAVY 360
  361 SMMSWPGDAP PEGWNRTRHV IIIMTDGLHN MGGDPVTVIE DIRDLLDIGR DRKNPREDYL 420
  421 DVYVFGVGPL VDPVNINALA SKKNNEQHVF KVKDMEDLEN VFYKMIDETK SLGLCGMVWE 480
  481 HQKGGDYYKQ PWQAKISVTR PLKGHENCMG AVVSEYFVLT AAHCFTVEDQ KHSIKVNVEG 540
  541 KRRDLEIEEV LFHPNYDING KKAEGISEFY DYDVALIKLK TKLKYSQTLR PICLPCTEGT 600
  601 TRALRLPQTA TCKQHKEELL PMKDVKALFV SEEGKKLTRK EVYIKNGEKK ASCERDATKA 660
  661 QGYEKVKVAS EVVTPRFLCT GGVDPYADPN TCKGDSGGPL IVHKRSRFIQ VGVISWGVVD 720
  721 VCKDPRRQQL VPSYARDFHI NLFQVLPWLK EKLKDEDLGF L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle