YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9837579, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKEEKADE KQSSWKDFIY NPRTGEFIGR TASSWALIFL FYLVFYGFLA GMFTLTMWVM  60
   61 LQTLDDHTPK YRDRVANPGL MIRPRSLDIA FNRSIPQQYS KYVQHLEAFL QSYNDSLQEA 120
  121 NEPCQEGMYF EQDDVEEKKV CQFKRSQLRQ CSGLSDTTFG YSEGNPCIIV KMNRVIGLKP 180
  181 RGDPHIACTV KGDGTLQMQL YPDEGKIDKS FFPYYGKILH KNYVQPLVAV KLMLGENDYN 240
  241 IEHTVECKVE GSDLLNNDER DKFLGRVTFR INVQK

Type	Start	End	Confidence
Cytoplasmic	1	36	0.80
Transmembrane Helix	37	60	0.88
Non-Cytoplasmic	61	275	0.84