YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DLLC_DANRE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVLLTCFF ILISSHLGKS SGVFELKVLS FTSTSSVCKG SSDCQIFFRV CLKHSQALIL  60
   61 PEPPCTYGTG MSEILSADSI SSSAYISVPF NFKWPGIVSL IIETWNAETS DQSTENNNNM 120
  121 ISRLATKRRL AISEDWSQDV HLGRQSQLRF SYRVVCDEFY HGEECSDFCR PRNDTFGHFN 180
  181 CDAAGNRICL PGWKGDYCTE PICLSGCSEE NGYCEAPGEC KCRIGWEGPL CDECTRHPGC 240
  241 LHGTCNQPFQ CTCKEGWGGL FCNEDLNFCT NHKPCRNDAT CTNTGQGSYT CICKPGFSGK 300
  301 NCEIETNECD SNPCKNGGSC NDQENDYTCT CPQGFYGKNC EVSAMTCADG PCFNGGTCME 360
  361 KGSGSYSCRC PPGYMGSNCE KKIDRCSSDP CANGGQCLDL GNKATCRCRP GFTGSRCETN 420
  421 IDDCSSNPCQ NAGTCVDGIN GYTCTCTLGF SGKDCRVRSD ACSFMPCQNG GTCYTHFSGP 480
  481 VCQCPAGFMG TQCEYKQKPT PVNSPALPAA LIVSFTLGLI TLTLVICAAI VVLRQMRQNH 540
  541 KASSTTVRNN LDSVNNRISL SPTSPLGREK EAFLIPGGPF KVSNKDMALR STSVDTHSSD 600
  601 KSNYKQKMVD YNLSIDEKHT NNKLEKNSES TLLVPPLNYP KEGVYHPVYI IPEHIEQRVF 660
  661 ATEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle