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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|35903183, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPTEIGLF FTLLLSGSFC ATPEKKVCQG ANNKLTLLGT VEDHYQVLLR MYRNCTVVLE  60
   61 NLEITHITEK YDLSFLKSIQ EVGGYVLIAV NTVSKIPLEN LRIIRGHSLY EDKFALAVLV 120
  121 NFNNSIEQGV KELPLTSLTE ILKGGVKFCR NDYLCNVGTI EWADILNMKS LPTIVSHNIS 180
  181 YGKNCGKCDP SCFNGSCWGT GPDKCQRMTK VICAEQCSGR CKGPRPIDCC NEHCAAGCTG 240
  241 PRPTDCLACK DFQDEGTCKD ACPRLMLYDP NTHQLAPNPY GKYSFGATCI KTCPHNYVVT 300
  301 DHGACVRTCS PGTYEVDEGG VRKCKRCEGL CPKVCNGLGM GPLANVLSIN ATNIDSFENC 360
  361 TKISGNVAIL STTFRGDPHT NTSGLDPAKL SVLSTVKEIT GYLMIQLWPE SMQSLSAFEN 420
  421 LEVIRGRTKT QGTYSFAVTK TAITHLGMRS LREISDGDVS IVKNKNLCYS SPEHWKRLFK 480
  481 SKQQSVKMIE NMDAATCANQ NSTCNEMCTA DGCWGPGPTM CFGCEHYSRG KHCVASCNLL 540
  541 NGEPREYEVN KTCMECDPEC LLMNETQTCN GPGPDKCTVC ANYKDGPHCV HRCPQGVPGE 600
  601 KDTLIWKYAD VTHVCQPCHE NCTQGCTGPD LKDCKDFKSS GLPMIAAGVV GGLLAFVILA 660
  661 LGVAVLLRRR HIRRKRTLRR LLQERELVEP LTPSGEAPNQ ALLRILKETE FKKIKVLGSG 720
  721 AFGTVHKGLW VPEGENVKIP VAIKVLREAT SPKANKEIMD EAYVMASVEH PHVCRLLGIC 780
  781 LTSTVQLITQ LMPYGCLLDY VRENKDRIGS QHLLNWCVQI AKGMNYLEER HLVHRDLAAR 840
  841 NVLVKTPQHV KITDFGLAKL LNADEKEYHA DGGKVPIKWM ALESIQHRTY THQSDVWSYG 900
  901 VTVWELMTFG TKPYDGIPAS EIAGVLEKGE RLPQPPICTI DVYMIMVKCW MIDAESRPRF 960
  961 RELIAEFTKM ARDPSRYLVI QGDDRMHLPS PSDSKFYRSL MSGELDEAVD ADEYLVPNHS1020
 1021 FFSSPSTSRT QLLHSVSLNS SFGNCNSRNG NGYPVRENSM VLRYIPDPTE RFQEGDFQPA1080
 1081 PGYNEYMNQN ESSMINPVYQ QPHGPPRTLL HSSPALDETE EEYLNCFKSP APASVVEYLN1140
 1141 TSHTQLLSTK PFFSMDNPDY QQDFCPLELK THTNGHLPAA QNQEYMGLEV H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle