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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TYRO3_DANRE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSLCILLF LLHFNEGIHG VRFTQKPFHQ TVTQGNMVRL GCAFEGLSEP EIIWMKDGEK  60
   61 LFSTDQMYIT LDPYHWETFH SVKSVQQQDA GKYWCEVEYH GAIISSEPAW ITVAGVPHFG 120
  121 VEPEDVAAFA GESFNLTCAA SGPPEPVEVL WWLGGEQNGD FTPSPSVLFV KGVNESIKFH 180
  181 CEPRNARGIS VSRTGTVHIK ARPDSLGRTG HHVSDFNITL TWSPGFTGHS QLSTCTIQLS 240
  241 RGPGEVKLPD VVVEVPPFQH VFEGLRSYSN YSVRVRCDNE VGSSPFSPWV DFHTPQAAPS 300
  301 AAPKNFTFDL SEQQLTLSWA TLEQEELRGR LQEELRGRLL AYKLQWNQGG ESQDPLLFKE 360
  361 NVAHLSGAGR FFNATFQVAA CTMAGCGPWS QPVLVMPVSA MQAQTQRGHM WVGLLFGLLV 420
  421 ATMVGLLLIV LIRNRGKETQ FGSAFAAQGA EVPVSFTAAR SFNRQFPELP ESTLDSLGIN 480
  481 SDLKAKLQDV LIFERLLTLG RMLGKGEFGS VREAFLKSEN NSGQKVAVKV LKTDINSSSD 540
  541 IEQCLKEAAY MKDFHHPNVI QLIGVSLHRR AQQRLPIPMV ILPFMKHGDL HTFLLMSRLG 600
  601 DEPFTVSQQI LIQFMLDIAR GMEYLSNKNI IHRDLAARNC MLNENMSVCV ADFGLSKKIY 660
  661 SGDYYRQGSV SKLPVKWIAL ESLADNVYTT QSDVWAFGVT MWEIMTRGQT PYPGVENSEI 720
  721 YEYLIKGERL KQPPDCPADI YEIMHSCWSP VPKCRPSFQH LIDQLELLWA KLNPAPVKEP 780
  781 LLYVNLEEED GEQANSGTRS SEEPSWGVPW QCAGIEEDEK DWLMVSSGAA LAIGGDYRYI 840
  841 IGPSVSAIDE ESRHSEDGLS EDIREEEEDV IINV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle