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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28279577, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVGWRPATL LLVFILTFIC LSDGSTYLSG QRQRSRLQRD RRNVRPNMIL ILTDDQDIEL  60
   61 GSMQAMNKTK RIMMQGGTHF SNAFATTPMC CPSRSTILTG KYVHNHHTYT NNENCSSPSW 120
  121 QAHHEPHTFA VHLNNSGYRT AFFGKYLNEY NGSYVPPGWR EWVALVKNSR FYNYTLCRNG 180
  181 IREKHGTQYP KDYLTDVITN DSINFFRMSK RMYPHRPVMM VLSHAAPHGP EDAAPQYSSA 240
  241 FPNASQHITP SYNHAPNPDK HWILRYTGPM KPVHMQFTNM LQRRRLQTLL SVDDSVEKVY 300
  301 NMLVETGELD NTYIIYMSDH GYHIGQFGLV KGKSMPYEFD IRIPFYVRGP NVEAGAINPH 360
  361 IVLNTDLAPT LLDMAGIDIP QDMDGKSILK LLETERPVNS FTRFHSYKKA KLWRDSFLVE 420
  421 RGKPLHKLAD GKEVEQNSLP KYQRVRDLCQ RAEHQTPCEQ PGQKWQCIED GTGMPRLYKC 480
  481 KGMAGLYAPR ALGLMAANRG QISAAHSGSD YCDCEPTASL KRKKALTKKK LKNKKSVPRN 540
  541 RWARSVPYNL DSNVYTLDLE KGYRPLNLNT SLMLGSKQAV YGQNEEYSGM GPTEDNFNSL 600
  601 TPPAALKVTY RCSILMNDTV KCDGGLYKSL QAWKDHKLHI EHEIGTLQTK IKNLREVKGH 660
  661 LKEVRPKECE CNKNMYQYSS RALFKLKSAQ THSVKMTSKD KKQWLMKEQK RRKKLRKLLK 720
  721 RLRNNDTCSM PGLTCFTHDN QHWQTAPFWT MGPFCACTSA NNNTYWCLRT INETHNFLFC 780
  781 EFATGFLEYF DLNTDPYQLM NGVSTLDRDA VNHMHQQLMK LRSCKGHKEC NQETGGKERN 840
  841 TLYDYRPLHR RKRPKVKKAS SKSMGQIWEG WVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle