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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|182891982, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKITLLLIM LLGVTHFIKP HRCEDDAKDD SAEDLGEEED DDDDDDDDDD EDADDTEVKE  60
   61 ENGVLVLTDA NFDTFIEGKD TVLVEFYAPW CGHCKQFAPE YEKIAQTLKE NDPPIPVAKV 120
  121 DATKASGLGS RFEVSGYPTI KILKKGEPLD YDGDRSEHAI VERVKEVAQP DWKPPPEATL 180
  181 VLTKDNFDDV VNNADIILVE FYAPWCGHCK GLAPEYEKAA KELSNRTPPI PLAKVDATAE 240
  241 SDLATRFGVS GYPTLKIFRK GKAFDYNGPR EKFGIVDYMS DQAGPPSKQV QTLKQVQELL 300
  301 RDGDDAVIVG VFSSDEDAAY EIYQEACNSL REDYKFMHTF NNDVTKFLKA SPGQVVMLQP 360
  361 EKFRSKHESA SHSLTIKDST PASEVQDFFK KHILPLVGHR RQSNDAKRYT KRPLVVVYYG 420
  421 VDFSFDYRVA TQFWRSKVLE VAKDFPEYTF AIADEEDYAD ELKSLGLSES GEEVNVGIVG 480
  481 EGGKKYAMEP EEFDSDVLRS FVMAFKKGKL KPIVKSQPLP KNNKGPVKVV VGKTFDEIVM 540
  541 DSKKDVLIEF YAPWCGHCKK LEPDYISLGK KYKNEKNLVI AKMDATANDV PHDSYKVEGF 600
  601 PTIYFAPSNN KQNPIKFEGG KRDVEEFSKF VEKHATKLSH KKDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle