YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42734418, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLEQILIL EPSNDLRFRG PFTDVVTTNL KLRNPSDRRV CFKVKTTAPR RYCVRPNSGI  60
   61 IDPGATVTIS VMLQPFDYDP NEKSKHKFMV QTIFAPSSVS DLEAMWKDAK PDDLMDSKLR 120
  121 CVFDMPSDND KMSELESSKP ACVLNSSKAE AAAGLRGSSV SMDDTEMRKL LEESRRLQTE 180
  181 VGRLTEENRQ LKDEGVRMRR CVPLSSSSML SKDSSSSSSS SSRCLPSLLV LIAAVFIGFF 240
  241 IGKFVL

Type	Start	End	Confidence
Non-Cytoplasmic	1	223	0.70
Transmembrane Helix	224	245	0.90
Cytoplasmic	246	246	0.69