YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47086357, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNNWNSTKL LGVLMLANFL IYIAVEVSRS HNHDRNAFKK NKMIPKEFWK KTKVSTAFWN  60
   61 REQERLDDIY YLPLVNASEL PPHFRGIPRW LNHSCKHDVN VTAQIEDFNS LPQRFQDFLL 120
  121 YMGCRSYPLI TRAPKVCSKP PYLLLAIKSL APHFDRRQAI RESWGRAGIL DGQRIATVFL 180
  181 LGNTASTDHF PDLSNMVKHE AELYGDVLQW DYRDTFFNLT LKEVLFLEWF GSHCASAQYV 240
  241 FKGDDDVFVN TRHMLAYLAN FSISSTQDLF IGDVITNAGP HRSRQLKYYI PESVFTGGYP 300
  301 PYAGGGGYLY SGSVGLRLRK ISRLVTLYPI DDVYTGMCLQ RLGLVPEKHS GFKTFDIEEK 360
  361 HRENPCAYKG LILVHPRSPQ DMIKIWSWIN DPNAICHITS TPKTKKTKYT PL

Type	Start	End	Confidence
Signal Peptide	1	24	0.44
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	412	0.95